ST dataset of subcortical MS

We used single-nucleus and spatial transcriptomics from subcortical MS and corresponding control tissues to map cell types and associated pathways to lesion and non-lesion areas.

Type: RNASeq
Archiver: European Genome-Phenome Archive (EGA)

1 Dataset

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD50000000520	This dataset contains the FASTQ files, the correspondent H&E pictures with the fiducial frames and the json files that were used for our paper. Within the json files names, one can find the information about the slide name (V11M111-111) and the capture area (A1) for each sample.	Illumina NovaSeq 6000	20